Curation Details
Interaction ID: IM-29972-9

Unique identifier for interactor Auniprotkb:Q13568
Unique identifier for interactor Buniprotkb:Q13263
Alternative identifier for interactor Aintact:EBI-3931258
ensembl:ENSP00000385352.2
ensembl:ENSP00000419149.1
uniprotkb:E7EQ16
uniprotkb:Q64GB1
uniprotkb:Q9BQF0
uniprotkb:Q64GB2
uniprotkb:A4D1J8
uniprotkb:A8DUA8
uniprotkb:A8DUA9
uniprotkb:Q6RCM8
uniprotkb:E7EW54
uniprotkb:Q64GA9
uniprotkb:Q1A7B4
intact:EBI-28983960
Alternative identifier for interactor Bintact:EBI-78139
uniprotkb:O00677
uniprotkb:Q7Z632
uniprotkb:Q93040
uniprotkb:Q96IM1
ensembl:ENSP00000253024.4
Aliases for Apsi-mi:irf5_human(display_long)
uniprotkb:IRF5(gene name)
psi-mi:IRF5(display_short)
Aliases for Bpsi-mi:tif1b_human(display_long)
uniprotkb:TRIM28(gene name)
psi-mi:TRIM28(display_short)
uniprotkb:KAP1(gene name synonym)
uniprotkb:RNF96(gene name synonym)
uniprotkb:TIF1B(gene name synonym)
uniprotkb:Tripartite motif-containing protein 28(gene name synonym)
uniprotkb:Nuclear corepressor KAP-1(gene name synonym)
uniprotkb:KRAB-associated protein 1(gene name synonym)
uniprotkb:KRAB-interacting protein 1(gene name synonym)
uniprotkb:RING finger protein 96(gene name synonym)
uniprotkb:E3 SUMO-protein ligase TRIM28(gene name synonym)
uniprotkb:RING-type E3 ubiquitin transferase TIF1-beta(gene name synonym)
Interaction detection methodspsi-mi:"MI:0007"(anti tag coimmunoprecipitation)
First authorEames et al. (2012)
Identifier of the publicationpubmed:22995936
imex:IM-29972
NCBI Taxonomy identifier for interactor Ataxid:9606(human)
taxid:9606(Homo sapiens)
NCBI Taxonomy identifier for interactor Btaxid:9606(human)
taxid:9606(Homo sapiens)
Interaction typespsi-mi:"MI:0915"(physical association)
Source databases and identifierspsi-mi:"MI:0471"(MINT)
Interaction identifier(s) in the corresponding source databaseintact:EBI-50419595
imex:IM-29972-9
Confidence scoreintact-miscore:0.52
Complex expansion-
Biological role AUnspecified role
Biological role BUnspecified role
Experimental role ABait
Experimental role BPrey
Interactor type AProtein
Interactor type BProtein
Annotations for the interactionfigure legend:fig. 2a
comment:"\"An N-terminal region of IRF5 (aa131–219) just outside of the DNA-binding domain, was found to be important for the interaction interface with KAP1, as shown by reduced binding of the 219 IRF5 mutant to KAP1 (Fig. 2A, lower blot – lane 4). It is clear that the DNA-binding domain (aa1–130), which is absent in both the 219 and DBD mutants, is not the region of IRF5 that interacts with KAP1, as the DBD mutant shows intact binding to KAP1 despite also lacking aa1–130 (Fig. 2A, lower blot – lane 3).\""
curation depth:imex curation
dataset:IBD - Inflammatory bowel disease
full coverage:Only protein-protein interactions
NCBI Taxonomy identifier for the host organismtaxid:9606(human-293)
taxid:9606(Homo sapiens HEK293 embryonic kidney cell)
Parameters of the interaction-
Creation date2023/12/05
Update date2024/11/14
negative Boolean valuefalse
Feature(s) for interactor Aone-strep-tag:n-n
ha tag:n-n
binding-associated region:131-219
Feature(s) for interactor Bflag tag:?-?
Stoichiometry for interactor A-
Stoichiometry for interactor B-
Participant identification method for interactor AWestern blot
Participant identification method for interactor BWestern blot