Curation Details
Interaction ID: IM-29952-3

Unique identifier for interactor Auniprotkb:O88895
Unique identifier for interactor Buniprotkb:P51448
Alternative identifier for interactor Aintact:EBI-302263
uniprotkb:O88896
intact:EBI-8820731
uniprotkb:Q3UM33
ensembl:ENSMUSP00000037981.8
Alternative identifier for interactor Bintact:EBI-1169722
uniprotkb:P70283
uniprotkb:P97741
uniprotkb:P97773
uniprotkb:Q923G1
ensembl:ENSMUSP00000034766.7
Aliases for Apsi-mi:hdac3_mouse(display_long)
uniprotkb:Hdac3(gene name)
psi-mi:Hdac3(display_short)
uniprotkb:Protein deacetylase HDAC3(gene name synonym)
uniprotkb:Protein deacylase HDAC3(gene name synonym)
Aliases for Bpsi-mi:rora_mouse(display_long)
uniprotkb:Retinoid-related orphan receptor-alpha(gene name synonym)
uniprotkb:Nuclear receptor RZR-alpha(gene name synonym)
uniprotkb:Nuclear receptor subfamily 1 group F member 1(gene name synonym)
uniprotkb:Rora(gene name)
psi-mi:Rora(display_short)
uniprotkb:Nr1f1(gene name synonym)
uniprotkb:Rzra(gene name synonym)
uniprotkb:RAR-related orphan receptor A(gene name synonym)
Interaction detection methodspsi-mi:"MI:0006"(anti bait coimmunoprecipitation)
First authorOh et al. (2019)
Identifier of the publicationpubmed:31570593
imex:IM-29952
NCBI Taxonomy identifier for interactor Ataxid:10090(mouse)
taxid:10090(Mus musculus)
NCBI Taxonomy identifier for interactor Btaxid:10090(mouse)
taxid:10090(Mus musculus)
Interaction typespsi-mi:"MI:0914"(association)
Source databases and identifierspsi-mi:"MI:0471"(MINT)
Interaction identifier(s) in the corresponding source databaseintact:EBI-48429306
imex:IM-29952-3
Confidence scoreintact-miscore:0.35
Complex expansionpsi-mi:"MI:1060"(spoke expansion)
Biological role AUnspecified role
Biological role BUnspecified role
Experimental role ABait
Experimental role BPrey
Interactor type AProtein
Interactor type BProtein
Annotations for the interactionfigure legend:fig. 5a
curation depth:imex curation
dataset:IBD - Inflammatory bowel disease
full coverage:Only protein-protein interactions
NCBI Taxonomy identifier for the host organismtaxid:10090(mouse-intestinal_epitheliu)
taxid:10090(Mouse intestinal epithelial cells)
Parameters of the interaction-
Creation date2023/11/15
Update date2023/11/15
negative Boolean valuefalse
Feature(s) for interactor A-
Feature(s) for interactor B-
Stoichiometry for interactor A-
Stoichiometry for interactor B-
Participant identification method for interactor AWestern blot
Participant identification method for interactor BWestern blot