Curation Details
Interaction ID: IM-29687-5

Unique identifier for interactor Auniprotkb:P37840
Unique identifier for interactor Buniprotkb:P0CG48
Alternative identifier for interactor Aintact:EBI-985879
uniprotkb:A8K2A4
ensembl:ENSP00000338345.3
ensembl:ENSP00000378437.1
ensembl:ENSP00000378442.4
ensembl:ENSP00000422238.1
ensembl:ENSP00000426955.1
ensembl:ENSP00000500990.1
uniprotkb:Q13701
uniprotkb:Q4JHI3
uniprotkb:Q6IAU6
Alternative identifier for interactor Bintact:EBI-3390054
uniprotkb:Q9BWD6
uniprotkb:P02249
uniprotkb:Q8WYN8
uniprotkb:Q91887
uniprotkb:Q9UPK7
uniprotkb:P62988
uniprotkb:P02250
uniprotkb:Q9UEK8
uniprotkb:Q6LDU5
uniprotkb:Q91888
uniprotkb:Q6LBL4
uniprotkb:Q9UEF2
uniprotkb:Q29120
uniprotkb:P02248
uniprotkb:Q9BX98
uniprotkb:Q9UEG1
ensembl:ENSP00000344818.5
ensembl:ENSP00000441543.1
Aliases for Apsi-mi:syua_human(display_long)
uniprotkb:Non-A beta component of AD amyloid(gene name synonym)
uniprotkb:Non-A4 component of amyloid precursor(gene name synonym)
uniprotkb:SNCA(gene name)
psi-mi:SNCA(display_short)
uniprotkb:NACP(gene name synonym)
uniprotkb:PARK1(gene name synonym)
Aliases for Bpsi-mi:ubc_human(display_long)
uniprotkb:UBC(gene name)
psi-mi:UBC(display_short)
Interaction detection methodspsi-mi:"MI:0006"(anti bait coimmunoprecipitation)
First authorKalia et al. (2011)
Identifier of the publicationimex:IM-29687
pubmed:21358815
NCBI Taxonomy identifier for interactor Ataxid:9606(human)
taxid:9606(Homo sapiens)
NCBI Taxonomy identifier for interactor Btaxid:9606(human)
taxid:9606(Homo sapiens)
Interaction typespsi-mi:"MI:0915"(physical association)
Source databases and identifierspsi-mi:"MI:0471"(MINT)
Interaction identifier(s) in the corresponding source databaseintact:EBI-26967257
imex:IM-29687-5
Confidence scoreintact-miscore:0.52
Complex expansionpsi-mi:"MI:1060"(spoke expansion)
Biological role AUnspecified role
Biological role BUnspecified role
Experimental role ABait
Experimental role BPrey
Interactor type AProtein
Interactor type BProtein
Annotations for the interactionfigure legend:fig. 2e
variable_condition:To generate the synKR-luc1 and synKR-luc2 constructs, a coding sequence was designed in which all lysines in human full-length wild-type a-syn were substituted with arginine using codons to minimize sequence differences between wild-type and mutant.
comment:"\"The mutant synKR-luc1, like wild-type syn-luc1, could be immunoprecipitated by anti-luc antibodies and was detected on Western blot with an anti-a-syn antibody (H3C) which binds to an epitope that contains no lysines within the carboxyl terminal region of a-syn. We discovered that one of the three bands from syn-luc1 immunoprecipitates detected by anti-HA antibodies was not present in synKR-luc1 immunoprecipitates, indicating that this band corresponds to a ubiquitinylated form of a-syn in cells (Fig. 2B).\""
dataset:Brain Disease - Neurological Diseases & Disorders
full coverage:Only protein-protein interactions
curation depth:imex curation
NCBI Taxonomy identifier for the host organismtaxid:9606(human-h4)
taxid:9606(Homo sapiens H4 neurogioma cell)
Parameters of the interaction-
Creation date2021/04/06
Update date2021/04/29
negative Boolean valuefalse
Feature(s) for interactor Agaussia-n:c-c
Feature(s) for interactor Bha tag:n-n
Stoichiometry for interactor A-
Stoichiometry for interactor B-
Participant identification method for interactor AAnti tag western blot
Participant identification method for interactor BAnti tag western blot