Curation Details
Interaction ID: IM-28932-5

Unique identifier for interactor Auniprotkb:O75398
Unique identifier for interactor Buniprotkb:P51608
Alternative identifier for interactor Aintact:EBI-718185
uniprotkb:O15152
uniprotkb:O75399
uniprotkb:O75510
uniprotkb:O75511
uniprotkb:O75512
uniprotkb:O75513
uniprotkb:Q9UET1
uniprotkb:A8K5R8
uniprotkb:A8K1F8
uniprotkb:C7T5V5
intact:EBI-28974412
ensembl:ENSP00000371846.3
Alternative identifier for interactor Bintact:EBI-1189067
ensembl:ENSP00000301948.6
uniprotkb:O15233
uniprotkb:Q6QHH9
uniprotkb:Q7Z384
Aliases for Apsi-mi:deaf1_human(display_long)
uniprotkb:Nuclear DEAF-1-related transcriptional regulator(gene name synonym)
uniprotkb:Suppressin(gene name synonym)
uniprotkb:Zinc finger MYND domain-containing protein 5(gene name synonym)
uniprotkb:DEAF1(gene name)
psi-mi:DEAF1(display_short)
uniprotkb:SPN(gene name synonym)
uniprotkb:ZMYND5(gene name synonym)
Aliases for Bpsi-mi:mecp2_human(display_long)
uniprotkb:MECP2(gene name)
psi-mi:MECP2(display_short)
Interaction detection methodspsi-mi:"MI:0006"(anti bait coimmunoprecipitation)
First authorPhilippe et al. (2018)
Identifier of the publicationpubmed:29636529
imex:IM-28932
NCBI Taxonomy identifier for interactor Ataxid:9606(human)
taxid:9606(Homo sapiens)
NCBI Taxonomy identifier for interactor Btaxid:9606(human)
taxid:9606(Homo sapiens)
Interaction typespsi-mi:"MI:0915"(physical association)
Source databases and identifierspsi-mi:"MI:0471"(MINT)
Interaction identifier(s) in the corresponding source databaseintact:EBI-26970542
imex:IM-28932-5
Confidence scoreintact-miscore:0.59
Complex expansion-
Biological role AUnspecified role
Biological role BUnspecified role
Experimental role ABait
Experimental role BPrey
Interactor type AProtein
Interactor type BProtein
Annotations for the interactionfigure legend:suppl. fig 1
comment:"\"To confirm the Deaf1-MeCP2 interaction, IgG, Deaf1, or MeCP2 antibodies were used to immunoprecipitate endogenous proteins from extracts of SKN-SH cells, hippocampal tissue or MEFs from Deaf1 knockout or wild-type mice. MeCP2 was detected in anti-MeCP2 precipitates in all samples, and was enriched when pulling down for Deaf1 in SKN-SH, Deaf1 +/+ MEF and WT hippocampal extracts, but not in Deaf1 −/− MEFs and Deaf1 KO hippocampal tissue (Supplementary Fig. S1). It was not possible to detect Deaf1 due to cross-reactivity with IgG heavy chain, and the lack of a suitable alternate Deaf1 antibody. Taken together, these results indicate that MeCP2 and Deaf1 proteins interact.\""
curation depth:imex curation
dataset:Brain Disease - Neurological Diseases & Disorders
full coverage:Only protein-protein interactions
NCBI Taxonomy identifier for the host organismtaxid:9606(human-sk-n-sh)
taxid:9606(Homo sapiens SK-N-SH neuroblastoma cell)
Parameters of the interaction-
Creation date2021/05/04
Update date2024/11/14
negative Boolean valuefalse
Feature(s) for interactor A-
Feature(s) for interactor B-
Stoichiometry for interactor A-
Stoichiometry for interactor B-
Participant identification method for interactor AWestern blot
Participant identification method for interactor BWestern blot