| Unique identifier for interactor A | uniprotkb:Q99608 |
| Unique identifier for interactor B | uniprotkb:P04406 |
| Alternative identifier for interactor A | intact:EBI-718177 ensembl:ENSP00000497916.1 uniprotkb:B2R6Z5 |
| Alternative identifier for interactor B | intact:EBI-354056 uniprotkb:E7EUT4 ensembl:ENSP00000229239.5 ensembl:ENSP00000380068.1 ensembl:ENSP00000380070.1 uniprotkb:P00354 uniprotkb:Q53X65 |
| Aliases for A | psi-mi:necd_human(display_long) uniprotkb:NDN(gene name) psi-mi:NDN(display_short) |
| Aliases for B | psi-mi:g3p_human(display_long) uniprotkb:GAPDH(gene name) psi-mi:GAPDH(display_short) uniprotkb:OK/SW-cl.12(orf name) uniprotkb:CDABP0047(orf name) uniprotkb:GAPD(gene name synonym) uniprotkb:Peptidyl-cysteine S-nitrosylase GAPDH(gene name synonym) |
| Interaction detection methods | psi-mi:"MI:1314"(proximity-dependent biotin identification) |
| First author | Sanderson et al. (2020) |
| Identifier of the publication | imex:IM-28889 pubmed:32529326 |
| NCBI Taxonomy identifier for interactor A | taxid:9606(human) taxid:9606(Homo sapiens) |
| NCBI Taxonomy identifier for interactor B | taxid:9606(human) taxid:9606(Homo sapiens) |
| Interaction types | psi-mi:"MI:2364"(proximity) |
| Source databases and identifiers | psi-mi:"MI:0471"(MINT) |
| Interaction identifier(s) in the corresponding source database | intact:EBI-26957435 imex:IM-28889-19 |
| Confidence score | intact-miscore:0.27 |
| Complex expansion | psi-mi:"MI:1060"(spoke expansion) |
| Biological role A | Unspecified role |
| Biological role B | Unspecified role |
| Experimental role A | Bait |
| Experimental role B | Prey |
| Interactor type A | Protein |
| Interactor type B | Protein |
| Annotations for the interaction | figure legend:ST1 F6A F6B comment:"\"We eliminated proteins found in only one of three replicate samples or present at high levels in a contaminant repository for affinity purification-mass spectrometry data (CRAPome Mellacheruvu et al. 2013). In all, 24 proteins were carried forward as necdin-proximate proteins.\"" comment:there is a large unexplained difference in interactor numbers between ST1 and Figure 6 results. dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease dataset:Brain Disease - Neurological Diseases & Disorders full coverage:Only protein-protein interactions curation depth:imex curation |
| NCBI Taxonomy identifier for the host organism | taxid:9606(human-293flp-in) taxid:9606(Homo sapiens HEK293flp-in embryonic kidney cell) |
| Parameters of the interaction | - |
| Creation date | 2021/02/19 |
| Update date | 2021/04/28 |
| negative Boolean value | false |
| Feature(s) for interactor A | fusion protein:c-c flag tag:c-c mutation with complex effect:280-280 |
| Feature(s) for interactor B | - |
| Stoichiometry for interactor A | - |
| Stoichiometry for interactor B | - |
| Participant identification method for interactor A | Sequence tag identification |
| Participant identification method for interactor B | Sequence tag identification |