Curation Details
Interaction ID: IM-28889-13

Unique identifier for interactor Auniprotkb:Q99608
Unique identifier for interactor Buniprotkb:Q9HB71
Alternative identifier for interactor Aintact:EBI-718177
ensembl:ENSP00000497916.1
uniprotkb:B2R6Z5
Alternative identifier for interactor Bintact:EBI-1047302
uniprotkb:B2ZWH2
uniprotkb:Q5R371
uniprotkb:B3KSF1
uniprotkb:Q5R370
intact:EBI-21351010
ensembl:ENSP00000356652.2
uniprotkb:O60666
Aliases for Apsi-mi:necd_human(display_long)
uniprotkb:NDN(gene name)
psi-mi:NDN(display_short)
Aliases for Bpsi-mi:cybp_human(display_long)
uniprotkb:Siah-interacting protein(gene name synonym)
uniprotkb:S100A6-binding protein(gene name synonym)
uniprotkb:CACYBP(gene name)
psi-mi:CACYBP(display_short)
uniprotkb:S100A6BP(gene name synonym)
uniprotkb:SIP(gene name synonym)
uniprotkb:PNAS-107(orf name)
Interaction detection methodspsi-mi:"MI:1314"(proximity-dependent biotin identification)
First authorSanderson et al. (2020)
Identifier of the publicationimex:IM-28889
pubmed:32529326
NCBI Taxonomy identifier for interactor Ataxid:9606(human)
taxid:9606(Homo sapiens)
NCBI Taxonomy identifier for interactor Btaxid:9606(human)
taxid:9606(Homo sapiens)
Interaction typespsi-mi:"MI:2364"(proximity)
Source databases and identifierspsi-mi:"MI:0471"(MINT)
Interaction identifier(s) in the corresponding source databaseintact:EBI-26956515
imex:IM-28889-13
Confidence scoreintact-miscore:0.27
Complex expansionpsi-mi:"MI:1060"(spoke expansion)
Biological role AUnspecified role
Biological role BUnspecified role
Experimental role ABait
Experimental role BPrey
Interactor type AProtein
Interactor type BProtein
Annotations for the interactionfigure legend:F6A F6B
comment:"\"We eliminated proteins found in only one of three replicate samples or present at high levels in a contaminant repository for affinity purification-mass spectrometry data (CRAPome Mellacheruvu et al. 2013). In all, 24 proteins were carried forward as necdin-proximate proteins.\""
dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease
dataset:Brain Disease - Neurological Diseases & Disorders
full coverage:Only protein-protein interactions
curation depth:imex curation
NCBI Taxonomy identifier for the host organismtaxid:9606(human-293flp-in)
taxid:9606(Homo sapiens HEK293flp-in embryonic kidney cell)
Parameters of the interaction-
Creation date2021/02/19
Update date2021/04/19
negative Boolean valuefalse
Feature(s) for interactor Amutation with complex effect:66-66
fusion protein:c-c
flag tag:c-c
Feature(s) for interactor B-
Stoichiometry for interactor A-
Stoichiometry for interactor B-
Participant identification method for interactor ASequence tag identification
Participant identification method for interactor BSequence tag identification