| Unique identifier for interactor A | uniprotkb:P14404-2 |
| Unique identifier for interactor B | uniprotkb:Q09028 |
| Alternative identifier for interactor A | intact:EBI-20976186 |
| Alternative identifier for interactor B | intact:EBI-620823 uniprotkb:D3DPQ3 uniprotkb:B2R6G9 ensembl:ENSP00000362592.4 uniprotkb:B4DRH0 uniprotkb:P31149 uniprotkb:Q53H02 uniprotkb:Q96BV9 |
| Aliases for A | psi-mi:p14404-2(display_long) uniprotkb:Myelodysplasia syndrome 1 protein homolog(gene name synonym) uniprotkb:Ecotropic virus integration site 1 protein(gene name synonym) uniprotkb:Evi1(gene name synonym) uniprotkb:Mds1(gene name synonym) uniprotkb:Mecom(gene name) psi-mi:Mecom(display_short) uniprotkb:MDS1 and EVI1 complex locus protein(gene name synonym) uniprotkb:Prdm3(gene name synonym) |
| Aliases for B | psi-mi:rbbp4_human(display_long) uniprotkb:Retinoblastoma-binding protein 4(gene name synonym) uniprotkb:Retinoblastoma-binding protein p48(gene name synonym) uniprotkb:Chromatin assembly factor 1 subunit C(gene name synonym) uniprotkb:Chromatin assembly factor I p48 subunit(gene name synonym) uniprotkb:Nucleosome-remodeling factor subunit RBAP48(gene name synonym) uniprotkb:RBBP4(gene name) psi-mi:RBBP4(display_short) uniprotkb:RBAP48(gene name synonym) |
| Interaction detection methods | psi-mi:"MI:0006"(anti bait coimmunoprecipitation) |
| First author | Ivanochko et al. (2018) |
| Identifier of the publication | pubmed:30462309 imex:IM-26659 doi:10.1093/nar/gky1192 |
| NCBI Taxonomy identifier for interactor A | taxid:10090(mouse) taxid:10090(Mus musculus) |
| NCBI Taxonomy identifier for interactor B | taxid:9606(human) taxid:9606(Homo sapiens) |
| Interaction types | psi-mi:"MI:0914"(association) |
| Source databases and identifiers | psi-mi:"MI:0471"(MINT) |
| Interaction identifier(s) in the corresponding source database | intact:EBI-20976183 imex:IM-26659-1 |
| Confidence score | intact-miscore:0.35 |
| Complex expansion | psi-mi:"MI:1060"(spoke expansion) |
| Biological role A | Unspecified role |
| Biological role B | Unspecified role |
| Experimental role A | Bait |
| Experimental role B | Prey |
| Interactor type A | Protein |
| Interactor type B | Protein |
| Annotations for the interaction | figure legend:f3c comment:"\"We performed co-immunoprecipitation with western blot analysis to directly contrast the interaction between full-length and ΔPR Prdm3 and Prdm16 isoforms with members of the core NuRD complex. Western blot analysis confirmed that the full-length Prdm3 and Prdm16 isoforms associated with RBBP4, MTA1 and HDAC2, while associations with the ΔPR isoforms were not detected (Figure 3C).\"" full coverage:Only protein-protein interactions curation depth:imex curation |
| NCBI Taxonomy identifier for the host organism | taxid:9606(human-t47d) taxid:9606(Homo sapiens T47D breast cancer tumour epithelial cell) |
| Parameters of the interaction | - |
| Creation date | 2018/11/23 |
| Update date | 2018/11/23 |
| negative Boolean value | false |
| Feature(s) for interactor A | green fluorescent protein tag:c-c necessary binding region:1-190 |
| Feature(s) for interactor B | - |
| Stoichiometry for interactor A | - |
| Stoichiometry for interactor B | - |
| Participant identification method for interactor A | Western blot |
| Participant identification method for interactor B | Western blot |