| Unique identifier for interactor A | uniprotkb:O00560 |
| Unique identifier for interactor B | uniprotkb:Q15223 |
| Alternative identifier for interactor A | intact:EBI-727004 uniprotkb:B4DUH3 uniprotkb:B7ZLN2 uniprotkb:B2R5Q7 ensembl:ENSP00000260130.4 ensembl:ENSP00000411771.2 uniprotkb:O43391 uniprotkb:O00173 uniprotkb:Q14CP2 |
| Alternative identifier for interactor B | intact:EBI-1771314 ensembl:ENSP00000264025.3 uniprotkb:O75465 uniprotkb:Q2M3D3 uniprotkb:Q9HBE6 uniprotkb:Q9HBW2 |
| Aliases for A | psi-mi:sdcb1_human(display_long) uniprotkb:Scaffold protein Pbp1(gene name synonym) uniprotkb:Pro-TGF-alpha cytoplasmic domain-interacting protein 18(gene name synonym) uniprotkb:Syndecan-binding protein 1(gene name synonym) uniprotkb:Melanoma differentiation-associated protein 9(gene name synonym) uniprotkb:SDCBP(gene name) psi-mi:SDCBP(display_short) uniprotkb:MDA9(gene name synonym) uniprotkb:SYCL(gene name synonym) |
| Aliases for B | psi-mi:nect1_human(display_long) uniprotkb:NECTIN1(gene name) psi-mi:NECTIN1(display_short) uniprotkb:HVEC(gene name synonym) uniprotkb:Herpes virus entry mediator C(gene name synonym) uniprotkb:Herpesvirus Ig-like receptor(gene name synonym) uniprotkb:Nectin cell adhesion molecule 1(gene name synonym) uniprotkb:PRR1(gene name synonym) uniprotkb:PVRL1(gene name synonym) uniprotkb:Poliovirus receptor-related protein 1(gene name synonym) |
| Interaction detection methods | psi-mi:"MI:0006"(anti bait coimmunoprecipitation) |
| First author | Garrido-Urbani et al. (2016) |
| Identifier of the publication | imex:IM-25073 pubmed:26787460 |
| NCBI Taxonomy identifier for interactor A | taxid:9606(human) taxid:9606(Homo sapiens) |
| NCBI Taxonomy identifier for interactor B | taxid:9606(human) taxid:9606(Homo sapiens) |
| Interaction types | psi-mi:"MI:0915"(physical association) |
| Source databases and identifiers | psi-mi:"MI:0471"(MINT) |
| Interaction identifier(s) in the corresponding source database | intact:EBI-11668438 imex:IM-25073-19 |
| Confidence score | intact-miscore:0.65 |
| Complex expansion | - |
| Biological role A | Unspecified role |
| Biological role B | Unspecified role |
| Experimental role A | Bait |
| Experimental role B | Prey |
| Interactor type A | Protein |
| Interactor type B | Protein |
| Annotations for the interaction | figure legend:f3a comment:"\"To confirm that the interaction relies on the C-terminus of nectin-1 we performed co-IPs of over-expressed nectin-1 (wild-type or truncated form) and syntenin (Fig. 3). Truncation of the nectin PDZ binding motif abrogated the interaction, confirming the importance of the C-terminus for the interaction.\"" full coverage:Only protein-protein interactions curation depth:imex curation |
| NCBI Taxonomy identifier for the host organism | taxid:9534(chlae-cos_7) taxid:9534(Cercopithecus aethiops simian cells transformed with SV40) |
| Parameters of the interaction | - |
| Creation date | 2016/03/29 |
| Update date | 2016/03/29 |
| negative Boolean value | false |
| Feature(s) for interactor A | myc tag:c-c |
| Feature(s) for interactor B | - |
| Stoichiometry for interactor A | - |
| Stoichiometry for interactor B | - |
| Participant identification method for interactor A | Western blot |
| Participant identification method for interactor B | Western blot |